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Introduction to JBrowseR
11 days ago
The one-liner | Adding tracks | A gallery | Where to next
JBrowseR 0.14.0
Colin Diesh
JBrowseR.Rmd
Comparing genomes: linear synteny and dotplots
20 days ago
Describe the four assemblies | One all-vs-all track between them | Stack them in a synteny view | The same PAF as a dotplot | Building the PAF from your own genomes
JBrowseR 0.14.0
Colin Diesh
comparative-synteny.Rmd
Custom browser tutorial
22 days ago
Describe the assembly | Add tracks | Enable gene-name search | Put it together | Show results computed in R | Reacting to clicks in Shiny
JBrowseR 0.14.0
Colin Diesh
custom-browser-tutorial.Rmd
Advanced JSON tutorial
29 days ago
What the options hold | From a JSON file | From an R list
JBrowseR 0.14.0
Colin Diesh
json-tutorial.Rmd
Hosting data for JBrowseR
29 days ago
Server requirements | Viewing local files
JBrowseR 0.14.0
Colin Diesh
creating-urls.Rmd